PhytophthoraV1, Main, Exploration, bibRecord, 000891

Two previously unknown Phytophthora species associated with brown rot of Pomelo (Citrus grandis) fruits in Vietnam.

Identifieur interne : 000891 ( Main/Exploration ); précédent : 000890; suivant : 000892

Two previously unknown Phytophthora species associated with brown rot of Pomelo (Citrus grandis) fruits in Vietnam.

Auteurs : Ivana Puglisi [Italie] ; Alessandro De Patrizio [Italie] ; Leonardo Schena [Italie] ; Thomas Jung [République tchèque, Allemagne] ; Maria Evoli [Italie] ; Antonella Pane [Italie] ; Nguyen Van Hoa [Viêt Nam] ; Mai Van Tri [Viêt Nam] ; Sandra Wright [Suède] ; Mauritz Ramstedt [Suède] ; Christer Olsson [Suède] ; Roberto Faedda [Italie] ; Gaetano Magnano Di San Lio [Italie] ; Santa Olga Cacciola [Italie]

Source :

PloS one [ 1932-6203 ] ; 2017.

RBID : pubmed:28208159

Descripteurs français

KwdFr :
- ADN fongique (génétique), Analyse de séquence d'ADN (MeSH), Citrus (croissance et développement), Citrus (génétique), Citrus (microbiologie), Fruit (microbiologie), Maladies des plantes (microbiologie), Phylogenèse (MeSH), Phytophthora (classification), Phytophthora (isolement et purification), Racines de plante (microbiologie), Vietnam (MeSH).
MESH :
- croissance et développement : Citrus.
- génétique : ADN fongique, Citrus, Phytophthora.
- isolement et purification : Phytophthora.
- microbiologie : Citrus, Fruit, Maladies des plantes, Racines de plante.
- Analyse de séquence d'ADN, Phylogenèse, Vietnam.

English descriptors

KwdEn :
- Citrus (genetics), Citrus (growth & development), Citrus (microbiology), DNA, Fungal (genetics), Fruit (microbiology), Phylogeny (MeSH), Phytophthora (classification), Phytophthora (isolation & purification), Plant Diseases (microbiology), Plant Roots (microbiology), Sequence Analysis, DNA (MeSH), Vietnam (MeSH).
MESH :
- chemical , genetics : DNA, Fungal.
- classification : Phytophthora.
- genetics : Citrus.
- growth & development : Citrus.
- isolation & purification : Phytophthora.
- microbiology : Citrus, Fruit, Plant Diseases, Plant Roots.
- Phylogeny, Sequence Analysis, DNA, Vietnam.

Abstract

Two distinct Phytophthora taxa were found to be associated with brown rot of pomelo (Citrus grandis), a new disease of this ancestral Citrus species, in the Vinh Long province, Mekong River Delta area, southern Vietnam. On the basis of morphological characters and using the ITS1-5.8S-ITS2 region of the rDNA and the cytochrome oxidase subunit 1 (COI) as barcode genes, one of the two taxa was provisionally named as Phytophthora sp. prodigiosa, being closely related to but distinct from P. insolita, a species in Phytophthora Clade 9, while the other one, was closely related to but distinct from the Clade 2 species P. meadii and was informally designated as Phytophthora sp. mekongensis. Isolates of P. sp. prodigiosa and P. sp. mekongensis were also obtained from necrotic fibrous roots of Volkamer lemon (C. volkameriana) rootstocks grafted with 'King' mandarin (Citrus nobilis) and from trees of pomelo, respectively, in other provinces of the Mekong River Delta, indicating a widespread occurrence of both Phytophthora species in this citrus-growing area. Koch's postulates were fulfilled via pathogenicity tests on fruits of various Citrus species, including pomelo, grapefruit (Citrus x paradisi), sweet orange (Citrus x sinensis) and bergamot (Citrus x bergamia) as well as on the rootstock of 2-year-old trees of pomelo and sweet orange on 'Carrizo' citrange (C. sinensis 'Washington Navel' x Poncirus trifoliata). This is the first report of a Phytophthora species from Clade 2 other than P. citricola and P. citrophthora as causal agent of fruit brown rot of Citrus worldwide and the first report of P. insolita complex in Vietnam. Results indicate that likely Vietnam is still an unexplored reservoir of Phytophthora diversity.

DOI: 10.1371/journal.pone.0172085
PubMed: 28208159
PubMed Central: PMC5313238

Affiliations:

Allemagne, Italie, République tchèque, Suède, Viêt Nam

Links toward previous steps (curation, corpus...)

to stream Main, to step Corpus: 000A39
to stream Main, to step Curation: 000A39

Le document en format XML

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<author><name sortKey="Cacciola, Santa Olga" sort="Cacciola, Santa Olga" uniqKey="Cacciola S" first="Santa Olga" last="Cacciola">Santa Olga Cacciola</name>
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<author><name sortKey="Jung, Thomas" sort="Jung, Thomas" uniqKey="Jung T" first="Thomas" last="Jung">Thomas Jung</name>
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<author><name sortKey="Evoli, Maria" sort="Evoli, Maria" uniqKey="Evoli M" first="Maria" last="Evoli">Maria Evoli</name>
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<country xml:lang="fr">Italie</country>
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<author><name sortKey="Pane, Antonella" sort="Pane, Antonella" uniqKey="Pane A" first="Antonella" last="Pane">Antonella Pane</name>
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<country xml:lang="fr">Italie</country>
<wicri:regionArea>Department of Agriculture, Food and Environment, University of Catania, Catania</wicri:regionArea>
<wicri:noRegion>Catania</wicri:noRegion>
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<author><name sortKey="Van Hoa, Nguyen" sort="Van Hoa, Nguyen" uniqKey="Van Hoa N" first="Nguyen" last="Van Hoa">Nguyen Van Hoa</name>
<affiliation wicri:level="1"><nlm:affiliation>Southern Horticultural Research Institute, My Tho, Tien Giang, Vietnam.</nlm:affiliation>
<country xml:lang="fr">Viêt Nam</country>
<wicri:regionArea>Southern Horticultural Research Institute, My Tho, Tien Giang</wicri:regionArea>
<wicri:noRegion>Tien Giang</wicri:noRegion>
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<author><name sortKey="Van Tri, Mai" sort="Van Tri, Mai" uniqKey="Van Tri M" first="Mai" last="Van Tri">Mai Van Tri</name>
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<country xml:lang="fr">Viêt Nam</country>
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<author><name sortKey="Wright, Sandra" sort="Wright, Sandra" uniqKey="Wright S" first="Sandra" last="Wright">Sandra Wright</name>
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<country xml:lang="fr">Suède</country>
<wicri:regionArea>Department of Electronics, Mathematics and Natural Sciences, University of Gävle, Gävle</wicri:regionArea>
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<author><name sortKey="Ramstedt, Mauritz" sort="Ramstedt, Mauritz" uniqKey="Ramstedt M" first="Mauritz" last="Ramstedt">Mauritz Ramstedt</name>
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<author><name sortKey="Olsson, Christer" sort="Olsson, Christer" uniqKey="Olsson C" first="Christer" last="Olsson">Christer Olsson</name>
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<author><name sortKey="Magnano Di San Lio, Gaetano" sort="Magnano Di San Lio, Gaetano" uniqKey="Magnano Di San Lio G" first="Gaetano" last="Magnano Di San Lio">Gaetano Magnano Di San Lio</name>
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<profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Citrus (genetics)</term>
<term>Citrus (growth & development)</term>
<term>Citrus (microbiology)</term>
<term>DNA, Fungal (genetics)</term>
<term>Fruit (microbiology)</term>
<term>Phylogeny (MeSH)</term>
<term>Phytophthora (classification)</term>
<term>Phytophthora (isolation & purification)</term>
<term>Plant Diseases (microbiology)</term>
<term>Plant Roots (microbiology)</term>
<term>Sequence Analysis, DNA (MeSH)</term>
<term>Vietnam (MeSH)</term>
</keywords>
<keywords scheme="KwdFr" xml:lang="fr"><term>ADN fongique (génétique)</term>
<term>Analyse de séquence d'ADN (MeSH)</term>
<term>Citrus (croissance et développement)</term>
<term>Citrus (génétique)</term>
<term>Citrus (microbiologie)</term>
<term>Fruit (microbiologie)</term>
<term>Maladies des plantes (microbiologie)</term>
<term>Phylogenèse (MeSH)</term>
<term>Phytophthora (classification)</term>
<term>Phytophthora (isolement et purification)</term>
<term>Racines de plante (microbiologie)</term>
<term>Vietnam (MeSH)</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>DNA, Fungal</term>
</keywords>
<keywords scheme="MESH" qualifier="classification" xml:lang="en"><term>Phytophthora</term>
</keywords>
<keywords scheme="MESH" qualifier="croissance et développement" xml:lang="fr"><term>Citrus</term>
</keywords>
<keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Citrus</term>
</keywords>
<keywords scheme="MESH" qualifier="growth & development" xml:lang="en"><term>Citrus</term>
</keywords>
<keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>ADN fongique</term>
<term>Citrus</term>
<term>Phytophthora</term>
</keywords>
<keywords scheme="MESH" qualifier="isolation & purification" xml:lang="en"><term>Phytophthora</term>
</keywords>
<keywords scheme="MESH" qualifier="isolement et purification" xml:lang="fr"><term>Phytophthora</term>
</keywords>
<keywords scheme="MESH" qualifier="microbiologie" xml:lang="fr"><term>Citrus</term>
<term>Fruit</term>
<term>Maladies des plantes</term>
<term>Racines de plante</term>
</keywords>
<keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Citrus</term>
<term>Fruit</term>
<term>Plant Diseases</term>
<term>Plant Roots</term>
</keywords>
<keywords scheme="MESH" xml:lang="en"><term>Phylogeny</term>
<term>Sequence Analysis, DNA</term>
<term>Vietnam</term>
</keywords>
<keywords scheme="MESH" xml:lang="fr"><term>Analyse de séquence d'ADN</term>
<term>Phylogenèse</term>
<term>Vietnam</term>
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<front><div type="abstract" xml:lang="en">Two distinct Phytophthora taxa were found to be associated with brown rot of pomelo (Citrus grandis), a new disease of this ancestral Citrus species, in the Vinh Long province, Mekong River Delta area, southern Vietnam. On the basis of morphological characters and using the ITS1-5.8S-ITS2 region of the rDNA and the cytochrome oxidase subunit 1 (COI) as barcode genes, one of the two taxa was provisionally named as Phytophthora sp. prodigiosa, being closely related to but distinct from P. insolita, a species in Phytophthora Clade 9, while the other one, was closely related to but distinct from the Clade 2 species P. meadii and was informally designated as Phytophthora sp. mekongensis. Isolates of P. sp. prodigiosa and P. sp. mekongensis were also obtained from necrotic fibrous roots of Volkamer lemon (C. volkameriana) rootstocks grafted with 'King' mandarin (Citrus nobilis) and from trees of pomelo, respectively, in other provinces of the Mekong River Delta, indicating a widespread occurrence of both Phytophthora species in this citrus-growing area. Koch's postulates were fulfilled via pathogenicity tests on fruits of various Citrus species, including pomelo, grapefruit (Citrus x paradisi), sweet orange (Citrus x sinensis) and bergamot (Citrus x bergamia) as well as on the rootstock of 2-year-old trees of pomelo and sweet orange on 'Carrizo' citrange (C. sinensis 'Washington Navel' x Poncirus trifoliata). This is the first report of a Phytophthora species from Clade 2 other than P. citricola and P. citrophthora as causal agent of fruit brown rot of Citrus worldwide and the first report of P. insolita complex in Vietnam. Results indicate that likely Vietnam is still an unexplored reservoir of Phytophthora diversity.</div>
</front>
</TEI>
<pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">28208159</PMID>
<DateCompleted><Year>2017</Year>
<Month>08</Month>
<Day>29</Day>
</DateCompleted>
<DateRevised><Year>2019</Year>
<Month>02</Month>
<Day>08</Day>
</DateRevised>
<Article PubModel="Electronic-eCollection"><Journal><ISSN IssnType="Electronic">1932-6203</ISSN>
<JournalIssue CitedMedium="Internet"><Volume>12</Volume>
<Issue>2</Issue>
<PubDate><Year>2017</Year>
</PubDate>
</JournalIssue>
<Title>PloS one</Title>
<ISOAbbreviation>PLoS One</ISOAbbreviation>
</Journal>
<ArticleTitle>Two previously unknown Phytophthora species associated with brown rot of Pomelo (Citrus grandis) fruits in Vietnam.</ArticleTitle>
<Pagination><MedlinePgn>e0172085</MedlinePgn>
</Pagination>
<ELocationID EIdType="doi" ValidYN="Y">10.1371/journal.pone.0172085</ELocationID>
<Abstract><AbstractText>Two distinct Phytophthora taxa were found to be associated with brown rot of pomelo (Citrus grandis), a new disease of this ancestral Citrus species, in the Vinh Long province, Mekong River Delta area, southern Vietnam. On the basis of morphological characters and using the ITS1-5.8S-ITS2 region of the rDNA and the cytochrome oxidase subunit 1 (COI) as barcode genes, one of the two taxa was provisionally named as Phytophthora sp. prodigiosa, being closely related to but distinct from P. insolita, a species in Phytophthora Clade 9, while the other one, was closely related to but distinct from the Clade 2 species P. meadii and was informally designated as Phytophthora sp. mekongensis. Isolates of P. sp. prodigiosa and P. sp. mekongensis were also obtained from necrotic fibrous roots of Volkamer lemon (C. volkameriana) rootstocks grafted with 'King' mandarin (Citrus nobilis) and from trees of pomelo, respectively, in other provinces of the Mekong River Delta, indicating a widespread occurrence of both Phytophthora species in this citrus-growing area. Koch's postulates were fulfilled via pathogenicity tests on fruits of various Citrus species, including pomelo, grapefruit (Citrus x paradisi), sweet orange (Citrus x sinensis) and bergamot (Citrus x bergamia) as well as on the rootstock of 2-year-old trees of pomelo and sweet orange on 'Carrizo' citrange (C. sinensis 'Washington Navel' x Poncirus trifoliata). This is the first report of a Phytophthora species from Clade 2 other than P. citricola and P. citrophthora as causal agent of fruit brown rot of Citrus worldwide and the first report of P. insolita complex in Vietnam. Results indicate that likely Vietnam is still an unexplored reservoir of Phytophthora diversity.</AbstractText>
</Abstract>
<AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Puglisi</LastName>
<ForeName>Ivana</ForeName>
<Initials>I</Initials>
<AffiliationInfo><Affiliation>Department of Agriculture, Food and Environment, University of Catania, Catania, Italy.</Affiliation>
</AffiliationInfo>
<AffiliationInfo><Affiliation>Dipartimento di Agraria, Università Mediterranea di Reggio Calabria, Feo di Vito, Reggio Calabria, Italy.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>De Patrizio</LastName>
<ForeName>Alessandro</ForeName>
<Initials>A</Initials>
<AffiliationInfo><Affiliation>Department of Agriculture, Food and Environment, University of Catania, Catania, Italy.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Schena</LastName>
<ForeName>Leonardo</ForeName>
<Initials>L</Initials>
<AffiliationInfo><Affiliation>Dipartimento di Agraria, Università Mediterranea di Reggio Calabria, Feo di Vito, Reggio Calabria, Italy.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Jung</LastName>
<ForeName>Thomas</ForeName>
<Initials>T</Initials>
<AffiliationInfo><Affiliation>Phytophthora Research Center Mendel University, Zemedelska 1, 613 00 Brno, Czech Republic.</Affiliation>
</AffiliationInfo>
<AffiliationInfo><Affiliation>Phytophthora Research and Consultancy, Am Rain 9, Nußdorf, Germany.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Evoli</LastName>
<ForeName>Maria</ForeName>
<Initials>M</Initials>
<AffiliationInfo><Affiliation>Department of Agriculture, Food and Environment, University of Catania, Catania, Italy.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Pane</LastName>
<ForeName>Antonella</ForeName>
<Initials>A</Initials>
<AffiliationInfo><Affiliation>Department of Agriculture, Food and Environment, University of Catania, Catania, Italy.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Van Hoa</LastName>
<ForeName>Nguyen</ForeName>
<Initials>N</Initials>
<AffiliationInfo><Affiliation>Southern Horticultural Research Institute, My Tho, Tien Giang, Vietnam.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Van Tri</LastName>
<ForeName>Mai</ForeName>
<Initials>M</Initials>
<AffiliationInfo><Affiliation>Southern Horticultural Research Institute, My Tho, Tien Giang, Vietnam.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Wright</LastName>
<ForeName>Sandra</ForeName>
<Initials>S</Initials>
<AffiliationInfo><Affiliation>Department of Electronics, Mathematics and Natural Sciences, University of Gävle, Gävle, Sweden.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Ramstedt</LastName>
<ForeName>Mauritz</ForeName>
<Initials>M</Initials>
<AffiliationInfo><Affiliation>Department of Forest Mycology and Plant Pathology, Swedish Agricultural University (SLU), Uppsala, Sweden.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Olsson</LastName>
<ForeName>Christer</ForeName>
<Initials>C</Initials>
<AffiliationInfo><Affiliation>Department of Biological and Environmental Sciences, Gothenburg University, Gothenburg, Sweden.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Faedda</LastName>
<ForeName>Roberto</ForeName>
<Initials>R</Initials>
<AffiliationInfo><Affiliation>Department of Agriculture, Food and Environment, University of Catania, Catania, Italy.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Magnano di San Lio</LastName>
<ForeName>Gaetano</ForeName>
<Initials>G</Initials>
<AffiliationInfo><Affiliation>Dipartimento di Agraria, Università Mediterranea di Reggio Calabria, Feo di Vito, Reggio Calabria, Italy.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Cacciola</LastName>
<ForeName>Santa Olga</ForeName>
<Initials>SO</Initials>
<Identifier Source="ORCID">http://orcid.org/0000-0001-7926-3601</Identifier>
<AffiliationInfo><Affiliation>Department of Agriculture, Food and Environment, University of Catania, Catania, Italy.</Affiliation>
</AffiliationInfo>
</Author>
</AuthorList>
<Language>eng</Language>
<PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType>
</PublicationTypeList>
<ArticleDate DateType="Electronic"><Year>2017</Year>
<Month>02</Month>
<Day>16</Day>
</ArticleDate>
</Article>
<MedlineJournalInfo><Country>United States</Country>
<MedlineTA>PLoS One</MedlineTA>
<NlmUniqueID>101285081</NlmUniqueID>
<ISSNLinking>1932-6203</ISSNLinking>
</MedlineJournalInfo>
<ChemicalList><Chemical><RegistryNumber>0</RegistryNumber>
<NameOfSubstance UI="D004271">DNA, Fungal</NameOfSubstance>
</Chemical>
</ChemicalList>
<CitationSubset>IM</CitationSubset>
<MeshHeadingList><MeshHeading><DescriptorName UI="D002957" MajorTopicYN="N">Citrus</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName>
<QualifierName UI="Q000254" MajorTopicYN="N">growth & development</QualifierName>
<QualifierName UI="Q000382" MajorTopicYN="Y">microbiology</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D004271" MajorTopicYN="N">DNA, Fungal</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D005638" MajorTopicYN="N">Fruit</DescriptorName>
<QualifierName UI="Q000382" MajorTopicYN="Y">microbiology</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D010802" MajorTopicYN="N">Phylogeny</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D010838" MajorTopicYN="N">Phytophthora</DescriptorName>
<QualifierName UI="Q000145" MajorTopicYN="N">classification</QualifierName>
<QualifierName UI="Q000302" MajorTopicYN="Y">isolation & purification</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D010935" MajorTopicYN="N">Plant Diseases</DescriptorName>
<QualifierName UI="Q000382" MajorTopicYN="Y">microbiology</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D018517" MajorTopicYN="N">Plant Roots</DescriptorName>
<QualifierName UI="Q000382" MajorTopicYN="Y">microbiology</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D017422" MajorTopicYN="N">Sequence Analysis, DNA</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D014744" MajorTopicYN="N">Vietnam</DescriptorName>
</MeshHeading>
</MeshHeadingList>
</MedlineCitation>
<PubmedData><History><PubMedPubDate PubStatus="received"><Year>2016</Year>
<Month>02</Month>
<Day>07</Day>
</PubMedPubDate>
<PubMedPubDate PubStatus="accepted"><Year>2017</Year>
<Month>01</Month>
<Day>31</Day>
</PubMedPubDate>
<PubMedPubDate PubStatus="entrez"><Year>2017</Year>
<Month>2</Month>
<Day>17</Day>
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<Month>8</Month>
<Day>30</Day>
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<affiliations><list><country><li>Allemagne</li>
<li>Italie</li>
<li>République tchèque</li>
<li>Suède</li>
<li>Viêt Nam</li>
</country>
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<tree><country name="Italie"><noRegion><name sortKey="Puglisi, Ivana" sort="Puglisi, Ivana" uniqKey="Puglisi I" first="Ivana" last="Puglisi">Ivana Puglisi</name>
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<name sortKey="Evoli, Maria" sort="Evoli, Maria" uniqKey="Evoli M" first="Maria" last="Evoli">Maria Evoli</name>
<name sortKey="Faedda, Roberto" sort="Faedda, Roberto" uniqKey="Faedda R" first="Roberto" last="Faedda">Roberto Faedda</name>
<name sortKey="Magnano Di San Lio, Gaetano" sort="Magnano Di San Lio, Gaetano" uniqKey="Magnano Di San Lio G" first="Gaetano" last="Magnano Di San Lio">Gaetano Magnano Di San Lio</name>
<name sortKey="Pane, Antonella" sort="Pane, Antonella" uniqKey="Pane A" first="Antonella" last="Pane">Antonella Pane</name>
<name sortKey="Puglisi, Ivana" sort="Puglisi, Ivana" uniqKey="Puglisi I" first="Ivana" last="Puglisi">Ivana Puglisi</name>
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Two previously unknown Phytophthora species associated with brown rot of Pomelo (Citrus grandis) fruits in Vietnam.

Two previously unknown Phytophthora species associated with brown rot of Pomelo (Citrus grandis) fruits in Vietnam.

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